wiki:DataIntegrations

Version 18 (modified by Richard Bramley, 9 years ago) ( diff )

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DataIntegrations

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A List of them all

Onyx

REDCap

BRICCS Study Leicester (hospital internal server)

Data Collection: Ongoing

CiviCRM Extract

  • Status: Required
  • Improvements Required:
  • Source: REDCap
  • Destination: CiviCRM
  • Technology: Drupal cron job
  • Description: Load status of REDCap questionnaire into CiviCRM BRICCS Study enrolment.

i2b2 Extract

  • Status: Completed
  • Improvements Required:
    • Add more fields as needs arise
    • No interview date, so no start date for observations
  • Source: REDCap
  • Destination: i2b2
  • Technology: i2b2 Mapped Importer
  • Description: Load questionnaire data into i2b2.

BRICCS Study External Sites (hospital N3 server)

Sites

  • Kettering: recruiting
  • Doncaster: recruiting
  • Sheffield: recruiting
  • Lincoln: recruiting
  • Grantham: recruiting
  • Chesterfield: recruiting
  • Northampton: planned
  • Royal Free Hospital: planned (might be DREAM Study)

CiviCRM Extract

  • Status: Not Required

i2b2 Extract

  • Status: Completed
  • Improvements Required:
    • Add more fields as needs arise
    • No interview date, so no start date for observations
  • Source: REDCap
  • Destination: i2b2
  • Technology: i2b2 Mapped Importer
  • Description: Load questionnaire data into i2b2.

CiviCRM

Common

HSCIC Practice Import

  • Status: Working
  • Improvements Required: None
  • Source: HSCIC practice details files
  • Destination: CiviCRM practice details
  • Technology: Drupal cron job

GENVASC Study

Data Collection: Ongoing

Recruitment ongoing. Will need to be able to continue amending participants records after recruitment is complete to track withdrawals.

ICE Message Import

  • Status: Working
  • Improvements Required: Amend the processing of ICE messages to require fewer manual amendments by the administrators.
  • Source: Server: UHLSQLPRIME01\UHLBRICCSDB Database: genvasc-ice
  • Destination: CiviCRM
  • Technology: PHP MS SQL Server connection

i2b2 Extract Available Patients

  • Status: Working
  • Improvements Required: None
  • Source: CiviCRM
  • Destination: i2b2
  • Technology: i2b2 Mapped Importer
  • Description: Load participant and consent information.

i2b2 Delete Withdrawn Patients

  • Status: Working
  • Improvements Required: None
  • Source: CiviCRM
  • Destination: i2b2
  • Technology: i2b2 Mapped Importer
  • Description: Delete participants who have withdrawn.
Improvements Required

Check that it also deletes excluded participants.

BRICCS Study

Data Collection: Ongoing

Recruitment ongoing. Will need to be able to continue amending participants records after recruitment is complete to track withdrawals.

i2b2 Delete Withdrawn Patients

  • Status: Required
  • Improvements Required: None
  • Source: CiviCRM
  • Destination: i2b2
  • Technology: i2b2 Mapped Importer
  • Description: Delete participants who have withdrawn.

NIHR Bio-Resource

Data Collection: Ongoing

Recruitment ongoing. Will need to be able to continue amending participants records after recruitment is complete to track withdrawals.

i2b2 Extract Available Patients

  • Status: Working
  • Improvements Required: None
  • Source: CiviCRM
  • Destination: i2b2
  • Technology: i2b2 Mapped Importer
  • Description: Load participant and consent information.

i2b2 Delete Withdrawn Patients

  • Status: Required
  • Improvements Required: None
  • Source: CiviCRM
  • Destination: i2b2
  • Technology: i2b2 Mapped Importer
  • Description: Delete participants who have withdrawn.

CaTissue

GENVASC Study

Data Collection: Ongoing

Participant Reconciliation

  • Status: Required
  • Improvements Required: None
  • Source: CiviCRM & CaTissue
  • Destination: Report
  • Technology: Drupal cron job?
  • Description: Reconcile the GPt numbers in CaTissue with those in CiviCRM to check that all samples have enrolments and all enrolments have samples.

BRICCS Study

Data Collection: Ongoing

Participant Reconciliation

  • Status: Required
  • Improvements Required: None
  • Source: CiviCRM & CaTissue
  • Destination: Report
  • Technology: Drupal cron job?
  • Description: Reconcile the BPt numbers in CaTissue with those in CiviCRM to check that all samples have enrolments and all enrolments have samples.

i2b2

GENVASC Study

Data Collection: Ongoing

GEM Primary Care Data

  • Status: Particially Written
  • Improvements Required: Need meeting with GEM
  • Source: GEM SystemOne and EMIS data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import primary care data from GEM

PATS Data

  • Status: Working
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital audit data

PMI Data

  • Status: Working
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital PMI data

Hospital HES Data

  • Status: Partially Written
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital HES data

Hospital Discharge Letters Data

  • Status: Partially Written
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital discharge data

National HES Data

  • Status: Required
  • Improvements Required: None
  • Source: HSCIC DARS
  • Destination: i2b2
  • Technology: ?
  • Description: Import national HES data

National ONS Cause of Death Data

  • Status: Required
  • Improvements Required: None
  • Source: HSCIC DARS
  • Destination: i2b2
  • Technology: ?
  • Description: Import national ONS Cause of Death data

BRICCS Study

Data Collection: Ongoing

PATS Data

  • Status: Working
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital audit data

PMI Data

  • Status: Working
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital PMI data

Hospital HES Data

  • Status: Partially Written
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital HES data

Hospital Discharge Letters Data

  • Status: Partially Written
  • Improvements Required: None
  • Source: UHL data warehouses
  • Destination: i2b2
  • Technology: SSIS
  • Description: Import hospital discharge data

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